Protein Association Discovery in Biomedical Literature

Houston, Texas USA May 27-May 31

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http://doi.ieeecomputersociety.org/10.1109/JCDL.2003.1204848

Third ACM/IEEE-CS Joint Conference on ...

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	ASCII Text	x
	Yueyu Fu, Javed Mostafa, Kazuhiro Seki, "Protein Association Discovery in Biomedical Literature," Digital Libraries, Joint Conference on, pp. 113, Third ACM/IEEE-CS Joint Conference on Digital Libraries (JCDL'03), 2003.

	BibTex	x
	@article{ 10.1109/JCDL.2003.1204848, author = {Yueyu Fu and Javed Mostafa and Kazuhiro Seki}, title = {Protein Association Discovery in Biomedical Literature}, journal ={Digital Libraries, Joint Conference on}, volume = {0}, year = {2003}, isbn = {0-7695-1939-3}, pages = {113}, doi = {http://doi.ieeecomputersociety.org/10.1109/JCDL.2003.1204848}, publisher = {IEEE Computer Society}, address = {Los Alamitos, CA, USA}, }

	RefWorks Procite/RefMan/Endnote	x
	TY - CONF JO - Digital Libraries, Joint Conference on TI - Protein Association Discovery in Biomedical Literature SN - 0-7695-1939-3 SP EP A1 - Yueyu Fu, A1 - Javed Mostafa, A1 - Kazuhiro Seki, PY - 2003 KW - null VL - 0 JA - Digital Libraries, Joint Conference on ER -

Yueyu Fu, Indiana University

Javed Mostafa, Indiana University

Kazuhiro Seki, Indiana University

Protein association discovery can directly contribute toward developing protein pathways; hence it is a significant problem in bioinformatics. LUCAS (Library of User-Oriented Concepts for Access Services) was designed to automatically extract and determine associations among proteins from biomedical literature. Such a tool has notable potential to automate database construction in biomedicine, instead of relying on experts? analysis. This paper reports on the mechanisms for automatically generating clusters of proteins. A formal evaluation of the system, based on a subset of 2000 MEDLINE titles and abstracts, has been conducted against Swiss-Prot database in which the associations among concepts are entered by experts manually.

Citation:

Yueyu Fu, Javed Mostafa, Kazuhiro Seki, "Protein Association Discovery in Biomedical Literature," jcdl, pp.113, Third ACM/IEEE-CS Joint Conference on Digital Libraries (JCDL'03), 2003

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