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GeneGrid: Grid Based Solution for Bioinformatics Application Integration and Experiment Execution
Dublin, Ireland June 23-June 24
DOI Bookmark: http://doi.ieeecomputersociety.org/10.1109/CBMS.2005.5718th IEEE Symposium on Computer-Based ...
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P. V. Jithesh, Queen?s University of Belfast
Noel Kelly, Queen?s University of Belfast
Paul Donachy, Queen?s University of Belfast
Terence Harmer, Queen?s University of Belfast
Ron Perrott, Queen?s University of Belfast
Mark McCurley, Fusion Antibodies Ltd.
Michael Townsley, Fusion Antibodies Ltd.
Jim Johnston, Fusion Antibodies Ltd.
Shane McKee, Amtec Medical Ltd.
GeneGrid is a collaborative industrial R&D project initiated by the Belfast e-Science Centre, under the UK e-Science Programme, with commercial partners involved in the research and development of antibodies and drugs. GeneGrid provides a platform for scientists, especially biologists, to access their collective skills, experiences and results in a secure, reliable and scalable manner through the creation of a ?Virtual Bioinformatics Laboratory?. It enables the seamless integration of a myriad of heterogeneous applications and datasets that span multiple administrative domains and locations across the globe, and present these to the scientist through a simple user friendly interface. This paper presents how the grid services of GeneGrid are involved in the integration of bioinformatics applications as well as in the creation and execution of in silico experiments. A real use case scenario is also presented, involving the identification of novel members belonging to a protein family, for demonstrating the capabilities of GeneGrid.
Citation:
P. V. Jithesh, Noel Kelly, Paul Donachy, Terence Harmer, Ron Perrott, Mark McCurley, Michael Townsley, Jim Johnston, Shane McKee, "GeneGrid: Grid Based Solution for Bioinformatics Application Integration and Experiment Execution," cbms, pp.523-528, 18th IEEE Symposium on Computer-Based Medical Systems (CBMS'05), 2005
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