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Normalized maximum likelihood model of order-1 for the compression of DNA sequences
Snowbird, Utah March 27-March 29
DOI Bookmark: http://doi.ieeecomputersociety.org/10.1109/DCC.2007.602007 Data Compression Conference (DCC ...
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Gergely Korodi, Ioan Tabus, "Normalized maximum likelihood model of order-1 for the compression of DNA sequences," Data Compression Conference, pp. 33-42, 2007 Data Compression Conference (DCC'07), 2007.
 
 
BibTex
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@article{ 10.1109/DCC.2007.60,
author = {Gergely Korodi and Ioan Tabus},
title = {Normalized maximum likelihood model of order-1 for the compression of DNA sequences},
journal ={Data Compression Conference},
volume = {0},
year = {2007},
issn = {1068-0314},
pages = {33-42},
doi = {http://doi.ieeecomputersociety.org/10.1109/DCC.2007.60},
publisher = {IEEE Computer Society},
address = {Los Alamitos, CA, USA},
}
 
 
RefWorks Procite/RefMan/Endnote
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TY - CONF
JO - Data Compression Conference
TI - Normalized maximum likelihood model of order-1 for the compression of DNA sequences
SN - 1068-0314
SP33
EP42
A1 - Gergely Korodi,
A1 - Ioan Tabus,
PY - 2007
KW - null
VL - 0
JA - Data Compression Conference
ER -
 
Gergely Korodi, Tampere University of Technology
Ioan Tabus, Tampere University of Technology
We present the NML model for classes of models with memory described by first order dependencies. The model is used for efficiently locating and encoding the best regressor present in a dictionary. By combining the order-1 NML with the order- 0 NML model the resulting algorithm achieves a consistent improvement over the earlier order-0 NML algorithm, and it is demonstrated to have superior performance on the practical compression of the human genome.
Citation:
Gergely Korodi, Ioan Tabus, "Normalized maximum likelihood model of order-1 for the compression of DNA sequences," dcc, pp.33-42, 2007 Data Compression Conference (DCC'07), 2007
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